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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4478173_4479488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4478173 - 4479488

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCGGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTCACCCCATTT

Flanking Amino Acid:

DKMETIFSTMRGKSLVLWSA

Intron Amino Acid Position:

711

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

61.2

0.25

1.1

54.2

41.4

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

44.5

-0.3

2.1

65.73

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044600

4447496 - 4483546

36051

ENSAPLT00000017112

4446364 - 4483546

37183