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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4480205_4480782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4480205 - 4480782

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

GTATGTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACGAT

U12 Branch Point Sequence:

TTGTGGCTGACG

Flanking Amino Acid:

YLESVARMTAQDVLSLGITL

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.4

39.5

Major BPS

48.7

-0

1.4

46.5

46.6

Major PPT

79.3

0.66

0.9

73.1

41.9

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

41.2

-0.8

2.6

54.95

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044600

4447496 - 4483546

36051

ENSAPLT00000017112

4446364 - 4483546

37183