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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4507482_4507914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4507482 - 4507914

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAGAT

U12 Branch Point Sequence:

GTGTTTTTACAG

Flanking Amino Acid:

FITVPVGGGESIRLTASDLT

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

55.1

0.13

1.2

52.7

41.6

Major PPT

79.2

0.66

72.2

42.7

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

-0.2

1.7

52.3

42.7

Associated Gene:

Gene:

CDCA8

Ensembl Gene ID:

ENSAPLG00000003470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003550

4506413 - 4510539

4127