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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4509652_4510121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4509652 - 4510121

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GACTTTTTAATT

Flanking Amino Acid:

SKKVLEAAATADLEITEINK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

83.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

67.1

0.61

1.2

72.9

38.6

Associated Gene:

Gene:

CDCA8

Ensembl Gene ID:

ENSAPLG00000003470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003550

4506413 - 4510539

4127