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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4511438_4511507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4511438 - 4511507

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

CTGTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CTGGGCTGAGCT

Flanking Amino Acid:

EALLEQLGQRREELRALRDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.5

40.3

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

0.43

0.9

62.1

34.8

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

43.4

-0.4

2.1

60.2

Associated Gene:

Gene:

C1orf109

Ensembl Gene ID:

ENSAPLG00000024192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042785

4510704 - 4512676

1973