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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4511688_4511767_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

4511688 - 4511767

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

ATGGAGCTCGCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

TTGGCCTTATGG

Flanking Amino Acid:

LQDVERYYRHLYLESKLLLL

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.9

-0

1.3

46.6

44.1

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

59.8

0.22

50.9

Minor 5ss

91.9

1.41

28.3

Minor BPS

49.2

-0.2

2.1

58.61

48.9

Associated Gene:

Gene:

C1orf109

Ensembl Gene ID:

ENSAPLG00000024192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042785

4510704 - 4512676

1973