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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4600616_4601025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4600616 - 4601025

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTATCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTTGTTATCT

Flanking Amino Acid:

ANGTMECSSPAQCEMSEWGP

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.5

36.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.8

0.54

69.8

41.2

Minor 5ss

36.8

-1.5

3.4

46.6

43.5

Minor BPS

53.8

0.2

2.3

78.81

43.9

Associated Gene:

Gene:

RSPO1

Ensembl Gene ID:

ENSAPLG00000006500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030322

4576572 - 4602001

25430

ENSAPLT00000006736

4589673 - 4602001

12329