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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4601215_4601843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4601215 - 4601843

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CTTTGCTTTACT

Flanking Amino Acid:

CTVQKSQCPEGKRKKKEEQG

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

63.6

0.34

65.3

32.1

Major PPT

79.7

0.67

0.9

74.1

35.3

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

0.49

2.1

Associated Gene:

Gene:

RSPO1

Ensembl Gene ID:

ENSAPLG00000006500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030322

4576572 - 4602001

25430

ENSAPLT00000006736

4589673 - 4602001

12329