Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_4617952_4618599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4617952 - 4618599

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGAA

5'SS Class:

major

3'SS Sequence:

TTATCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATCT

Flanking Amino Acid:

RAKAKRFSAIRIPKQLSEKV

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.3

35.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.8

0.78

0.7

81.3

30.4

Minor 5ss

43.6

-0.7

57.6

47.1

Minor BPS

60.8

0.42

1.6

74.5

43.2

Associated Gene:

Gene:

GNL2

Ensembl Gene ID:

ENSAPLG00000006508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006804

4609253 - 4621482

12230