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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4618680_4619380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4618680 - 4619380

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

AGATGCTTGAGT

Flanking Amino Acid:

CEEHKENEGRGSTENKRKRK

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

0.57

1.2

41.2

Major PPT

82.1

0.72

0.9

76.5

37.5

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

48.9

-0

2.1

66.84

43.8

Associated Gene:

Gene:

GNL2

Ensembl Gene ID:

ENSAPLG00000006508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006804

4609253 - 4621482

12230