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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4632141_4632517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4632141 - 4632517

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCAATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

CTGTCATTAACG

Flanking Amino Acid:

FSKSSVTSAAAVSALAGVQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

76.9

0.67

1.2

31.9

Major PPT

77.3

0.62

0.9

69.5

41.2

Minor 5ss

33.7

-1.9

3.4

49.9

46.4

Minor BPS

66.1

0.37

1.7

68.44

44.9

Associated Gene:

Gene:

MEAF6

Ensembl Gene ID:

ENSAPLG00000007127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007403

4625488 - 4636714

11227