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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4633619_4636680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4633619 - 4636680

Intron Length:

3062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTCCTTTCAAAT

Flanking Amino Acid:

HKKRKNKNRHSPSGMFDYDF

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

29.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.45

0.9

35.9

Minor 5ss

30.7

-2.2

3.1

40.9

45.4

Minor BPS

51.7

0.13

1.6

70.37

40.6

Associated Gene:

Gene:

MEAF6

Ensembl Gene ID:

ENSAPLG00000007127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007403

4625488 - 4636714

11227