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Intron Name: Anas_platyrhynchos_platyrhynchos_24_476598_478358_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
476598 - 478358

Intron Length:
1761

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACATGGC

5'SS Class:
major

3'SS Sequence:
TTGTTTTAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAA

U12 Branch Point Sequence:
TTGTTTTAAACA

Flanking Amino Acid:
DTHLFFNDLEECDQVHIEDV

Intron Amino Acid Position:
363

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1.1
64.1
40.9

Major BPS
69.5
0.49
1.2
63.7
43.9

Major PPT
76.5
0.6
1
74.1
39.5

Minor 5ss
31.3
-2.1
3.4
44
43.8

Minor BPS
64.2
0.44
1.6
74.03
38.5

Associated Gene:

Gene:
EYA3

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

444992 - 482659
37668

447666 - 483738
36073

447666 - 483753
36088