Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_4827611_4830206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4827611 - 4830206

Intron Length:

2596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

TGATCCCAACTA

Flanking Amino Acid:

GGRFMNFIKEAQWEGLTGRI

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

72.1

0.55

1.1

44.2

Major PPT

85.5

0.8

0.7

80.5

24.7

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

44.2

-0.4

2.1

57.54

Associated Gene:

Gene:

GRIK3

Ensembl Gene ID:

ENSAPLG00000007300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007633

4753545 - 4860226

106682