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Intron Name: Anas_platyrhynchos_platyrhynchos_24_493516_494627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

493516 - 494627

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTGTCTTTGTTC

Flanking Amino Acid:

DYDPDTLQVQDMVTYYLNLT

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

32.7

Major BPS

78.8

0.71

67.6

40.6

Major PPT

79.5

0.66

0.8

73.1

31.8

Minor 5ss

-1.9

3.5

48.2

47.9

Minor BPS

45.4

-0.3

3.4

68.56

38.2

Associated Gene:

Gene:

SMPDL3B

Ensembl Gene ID:

ENSAPLG00000002828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002872

493000 - 499949

6950