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Intron Name: Anas_platyrhynchos_platyrhynchos_24_495829_496406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

495829 - 496406

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCAC

5'SS Class:

major

3'SS Sequence:

TTGCATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TGGACCAGACCT

Flanking Amino Acid:

NEASIPLFRAGAFYSEKLPS

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

39.9

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

82.3

0.73

0.9

76.8

Minor 5ss

36.5

-1.5

3.4

49.6

Minor BPS

44.7

-0.3

63.76

45.6

Associated Gene:

Gene:

SMPDL3B

Ensembl Gene ID:

ENSAPLG00000002828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002872

493000 - 499949

6950