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Intron Name: Anas_platyrhynchos_platyrhynchos_24_496551_497111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

496551 - 497111

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TTTTGTCTATCT

Flanking Amino Acid:

LTSLIKQVFPDTKVYAAMGN

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

75.3

0.57

0.9

39.5

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

49.5

0.04

2.3

80.25

Associated Gene:

Gene:

SMPDL3B

Ensembl Gene ID:

ENSAPLG00000002828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002872

493000 - 499949

6950