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Intron Name: Anas_platyrhynchos_platyrhynchos_24_499475_499569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

499475 - 499569

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGGG

5'SS Class:

major

3'SS Sequence:

CCTCCCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GAGTCGCTGACG

Flanking Amino Acid:

PTGTQAEKKQRARSQNIVPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

47.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

74.8

0.56

0.7

68.5

Minor 5ss

34.3

-1.8

3.6

46.4

Minor BPS

43.4

-0.6

2.3

49.02

44.5

Associated Gene:

Gene:

RPA2

Ensembl Gene ID:

ENSAPLG00000002616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002663

499021 - 503117

4097