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Intron Name: Anas_platyrhynchos_platyrhynchos_24_499900_500653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

499900 - 500653

Intron Length:

754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

TCCTCTCTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

AATAGCAAAACC

Flanking Amino Acid:

MDVRQWVDTDEAGGENIVVP

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

71.8

38.2

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

64.9

0.34

1.1

71.1

33.6

Minor 5ss

43.1

-0.8

2.8

58.2

39.2

Minor BPS

42.8

-0.5

2.2

55.89

41.9

Associated Gene:

Gene:

RPA2

Ensembl Gene ID:

ENSAPLG00000002616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002663

499021 - 503117

4097