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Intron Name: Anas_platyrhynchos_platyrhynchos_24_500729_501355_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

500729 - 501355

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TAATCTCTGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

KVAGHLRSFQNKKSLVAFKI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.5

31.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.4

0.19

1.2

60.1

40.3

Minor 5ss

31.6

-2.1

3.2

38.8

46.5

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

RPA2

Ensembl Gene ID:

ENSAPLG00000002616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002663

499021 - 503117

4097