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Intron Name: Anas_platyrhynchos_platyrhynchos_24_502172_502924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

502172 - 502924

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAC

U12 Branch Point Sequence:

TTTTCTTCAAAG

Flanking Amino Acid:

QLPNVSMSTIKQAVEFLSSE

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

69.9

0.49

0.9

61.1

36.4

Major PPT

80.1

0.68

0.9

82.3

26.9

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

64.9

0.33

1.7

73.05

39.4

Associated Gene:

Gene:

RPA2

Ensembl Gene ID:

ENSAPLG00000002616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002663

499021 - 503117

4097