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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5048482_5050518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5048482 - 5050518

Intron Length:

2037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

AGTTGCTCACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

74.9

35.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

76.5

0.6

33.7

Minor 5ss

31.3

-2.1

3.2

40.8

38.7

Minor BPS

47.1

-0.2

2.2

62.85

43.2

Associated Gene:

Gene:

STK40

Ensembl Gene ID:

ENSAPLG00000008561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008923

5048369 - 5062986

14618