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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5052362_5053432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5052362 - 5053432

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

TTCCTCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

CTCCCCTGAACT

Flanking Amino Acid:

GVVHHHGLFQDRACEIIEDL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

78.8

0.65

0.7

24.3

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

66.8

0.61

1.5

78.42

43.5

Associated Gene:

Gene:

STK40

Ensembl Gene ID:

ENSAPLG00000008561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037083

5049522 - 5062986

13465

ENSAPLT00000036904

5050519 - 5064610

14092

ENSAPLT00000021010

5049522 - 5062986

13465

ENSAPLT00000008923

5048369 - 5062986

14618

ENSAPLT00000041812

5049522 - 5062309

12788