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Intron Name: Anas_platyrhynchos_platyrhynchos_24_506886_507442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

506886 - 507442

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ATTTATGTACAT

Flanking Amino Acid:

PRSRKVPSDTDMERSSDEHD

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

76.3

0.65

67.3

39.3

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

43.5

-0.4

2.3

68.23

42.6

Associated Gene:

Gene:

THEMIS2

Ensembl Gene ID:

ENSAPLG00000029421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039443

506679 - 513899

7221