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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5072841_5072999_R

Intron Information:

Intron Rank:

142460

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5072841 - 5072999

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GC-TG

5'SS Sequence:

GGG|GCAAAATCC

5'SS Class:

major

3'SS Sequence:

TGCCCTCCAGCTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAAAAA

U12 Branch Point Sequence:

AACCCCAAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.3

41.8

Major BPS

46.5

-0.2

49.3

29.7

Major PPT

39.4

-0.6

3.1

55.2

Minor 5ss

27.8

-2.5

34.3

41.5

Minor BPS

43.3

-0.5

1.9

51.06

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040419

5069846 - 5073074

3229