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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5076438_5077329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5076438 - 5077329

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

GCTGCTGTCATT

Flanking Amino Acid:

YTPKSKKYYLHDDREGEGAE

Intron Amino Acid Position:

894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

74.1

34.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

86.8

0.83

0.7

81.2

23.8

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

42.3

-0.5

2.3

59.22

45.2

Associated Gene:

Gene:

THRAP3

Ensembl Gene ID:

ENSAPLG00000009009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009407

5075586 - 5103697

28112