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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5084767_5086172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5084767 - 5086172

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTATGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CCTCTATGAACA

Flanking Amino Acid:

TAPGGGAFSKRYLEEQKTEN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

87.7

28.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

65.9

0.36

61.5

37.9

Minor 5ss

22.7

-3.1

3.9

33.8

42.3

Minor BPS

48.2

-0.1

1.7

58.43

Associated Gene:

Gene:

THRAP3

Ensembl Gene ID:

ENSAPLG00000009009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009407

5075586 - 5103697

28112