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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5171940_5172212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5171940 - 5172212

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ATTTCGTCCACA

Flanking Amino Acid:

AQSTAANPERGAARARMLPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

75.8

0.58

0.9

69.2

36.4

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

47.2

-0.2

2.6

69.95

42.4

Associated Gene:

Gene:

COL8A2

Ensembl Gene ID:

ENSAPLG00000025608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048386

5171867 - 5179504

7638