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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5172393_5177582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5172393 - 5177582

Intron Length:

5190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

CCTCTCTCCACA

Flanking Amino Acid:

PFREGKGQYLDMPPLLPMDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

73.4

37.5

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

31.4

-2.1

3.7

47.1

48.3

Minor BPS

46.2

-0.3

56.1

43.3

Associated Gene:

Gene:

COL8A2

Ensembl Gene ID:

ENSAPLG00000025608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048386

5171867 - 5179504

7638