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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5185487_5186042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5185487 - 5186042

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

VPKDDVLFELGNGIAALRSV

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

ADPRHL2

Ensembl Gene ID:

ENSAPLG00000009421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009827

5185194 - 5188666

3473