Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_5186731_5187556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5186731 - 5187556

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTGACCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GCTTTCTTGACC

Flanking Amino Acid:

REFDEVDMAKRFAEEYKKEP

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.8

85.2

31.7

Major BPS

0.87

0.8

85.6

Major PPT

61.1

0.25

1.1

55.8

39.9

Minor 5ss

34.9

-1.7

3.2

49.5

46.5

Minor BPS

72.8

0.7

1.2

73.9

37.2

Associated Gene:

Gene:

ADPRHL2

Ensembl Gene ID:

ENSAPLG00000009421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009827

5185194 - 5188666

3473