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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5207615_5208268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5207615 - 5208268

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CATTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTGCCTCCATT

Flanking Amino Acid:

RYHLVDKEHDSAEGSHVSGQ

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

83.1

0.74

0.8

77.1

31.2

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

54.7

0.23

2.1

79.83

42.7

Associated Gene:

Gene:

AGO3

Ensembl Gene ID:

ENSAPLG00000009642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010139

5207467 - 5234945

27479