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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5212297_5213483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5212297 - 5213483

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAC

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

GINNILVPHQRPSVFQQPVI

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.9

32.3

Major BPS

53.4

0.08

1.4

65.7

Major PPT

84.3

0.77

0.9

86.8

24.4

Minor 5ss

39.9

-1.1

3.2

59.5

44.6

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

AGO3

Ensembl Gene ID:

ENSAPLG00000009642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010139

5207467 - 5234945

27479