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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5213644_5213918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5213644 - 5213918

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

ATTTGCTTCACA

Flanking Amino Acid:

VILPGKTPVYAEVKRVGDTL

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

77.3

0.68

81.5

Major PPT

79.2

0.66

0.9

72.8

36.9

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

60.6

0.33

2.2

77.53

39.6

Associated Gene:

Gene:

AGO3

Ensembl Gene ID:

ENSAPLG00000009642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010139

5207467 - 5234945

27479