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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5221032_5222136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5221032 - 5222136

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTTCA

5'SS Class:

major

3'SS Sequence:

CTTTTTTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

GATAGCATAAAT

Flanking Amino Acid:

DVVLRHLPSMKYTPVGRSFF

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.4

35.1

Major BPS

62.2

0.3

1.1

68.9

Major PPT

72.4

0.5

69.2

41.8

Minor 5ss

40.8

-1

49.9

40.8

Minor BPS

-0.2

2.1

65.66

43.7

Associated Gene:

Gene:

AGO3

Ensembl Gene ID:

ENSAPLG00000009642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010139

5207467 - 5234945

27479