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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5242437_5243262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5242437 - 5243262

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGC

5'SS Class:

major

3'SS Sequence:

CTCTCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTCATTTCACC

Flanking Amino Acid:

FYLCSHAGIQGTSRPSHYYV

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.36

1.3

55.9

44.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

75.4

0.57

0.9

72.2

32.4

Minor 5ss

41.6

-0.9

3.4

59.3

45.4

Minor BPS

55.2

0.15

1.9

72.69

38.2

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129