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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5243365_5244195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5243365 - 5244195

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TTATTCCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTCTTTTTATT

Flanking Amino Acid:

RLFCADKNERIGKSGNIPAG

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.6

0.67

0.8

74.9

30.1

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

55.4

0.25

1.6

72.15

39.3

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129