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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5244331_5244845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5244331 - 5244845

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

ATCCACTCACTC

Flanking Amino Acid:

DGVPEGQLPQILHYELLAIR

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.6

33.8

Major BPS

64.9

0.37

29.8

Major PPT

82.1

0.72

0.8

73.5

37.1

Minor 5ss

28.1

-2.5

34.6

41.4

Minor BPS

43.3

-0.5

1.9

51.45

39.6

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129