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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5245041_5246958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5245041 - 5246958

Intron Length:

1918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TCTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TAACCTGTAAGC

Flanking Amino Acid:

GDGKKPSITAVVGSMDAHPS

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

59.2

39.9

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

-1.9

41.2

Minor BPS

45.8

-0.3

2.2

57.63

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129