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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5247050_5247360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5247050 - 5247360

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTTCGTATG

5'SS Class:

major

3'SS Sequence:

CCTTTTCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TCCTTTTCCACC

Flanking Amino Acid:

GINNILVPHQRSAVFQQPVI

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

65.3

45.8

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

76.9

0.61

0.8

70.5

Minor 5ss

35.1

-1.7

2.9

44.5

Minor BPS

46.7

-0.2

1.9

42.6

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129