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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5249164_5249795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5249164 - 5249795

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

GTTTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

AGCGCTCTGACC

Flanking Amino Acid:

PAPILQYGGRNRAIATPNQG

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

69.1

0.47

60.7

37.6

Major PPT

80.8

0.69

0.9

73.7

36.9

Minor 5ss

38.3

-1.3

2.8

40.5

45.4

Minor BPS

46.5

-0.3

1.7

53.03

38.8

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129