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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5251293_5252480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5251293 - 5252480

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGGCGG

5'SS Class:

major

3'SS Sequence:

CTGCCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTCTGAGTAGGT

Flanking Amino Acid:

NVTRRPASHQTFPLQLESGQ

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.4

55.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

65.5

0.35

57.8

38.5

Minor 5ss

31.5

-2.1

3.3

37.8

40.4

Minor BPS

36.3

-0.9

2.6

60.33

48.9

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129