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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5253001_5253283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5253001 - 5253283

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGATGTAT

5'SS Class:

major

3'SS Sequence:

ATCTGTCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

ATCATGGTATCT

Flanking Amino Acid:

AMWKMMLNIDVSATAFYKAQ

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

66.3

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

67.1

0.38

62.4

39.2

Minor 5ss

33.2

-1.9

3.4

43.2

46.3

Minor BPS

37.9

-0.8

2.6

57.88

45.3

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129