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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5253905_5254066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5253905 - 5254066

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

CTTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAT

U12 Branch Point Sequence:

AATGCCGTGATC

Flanking Amino Acid:

VTALPIGNERVDFEVTIPGE

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

60.8

44.4

Major BPS

56.3

0.16

1.3

48.7

45.1

Major PPT

77.5

0.62

0.7

69.2

31.4

Minor 5ss

29.4

-2.4

3.3

30.1

42.9

Minor BPS

48.1

-0.1

2.1

60.27

39.5

Associated Gene:

Gene:

AGO1

Ensembl Gene ID:

ENSAPLG00000010440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010926

5241340 - 5262468

21129