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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5270823_5271059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5270823 - 5271059

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTCT

5'SS Class:

major

3'SS Sequence:

CTTCTACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATAATTAAAT

Flanking Amino Acid:

GGVSEGQMKQVAWPELIAIR

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.2

64.2

42.6

Major BPS

0.75

78.6

Major PPT

78.5

0.64

0.8

70.3

35.3

Minor 5ss

43.8

-0.7

3.4

65.8

45.3

Minor BPS

54.5

0.22

1.9

74.52

40.8

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842