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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5271376_5271995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5271376 - 5271995

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CATTATTTAACA

Flanking Amino Acid:

GINNVLVPHQRPSVFQQPVI

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

84.8

28.2

Major BPS

79.5

0.73

0.9

36.9

Major PPT

73.6

0.53

39.1

Minor 5ss

40.3

-1.1

3.3

55.3

48.9

Minor BPS

68.1

0.57

1.5

73.39

38.3

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842