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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5272156_5272489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5272156 - 5272489

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAT

U12 Branch Point Sequence:

TTTTCTGTCACA

Flanking Amino Acid:

VILPGKTPVYAEVKRVGDTL

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

41.6

Major BPS

60.4

0.26

1.3

61.4

43.2

Major PPT

84.3

0.77

0.8

79.7

32.4

Minor 5ss

37.9

-1.4

3.1

45.3

44.7

Minor BPS

55.6

0.17

2.4

78.6

38.6

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842