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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5273577_5273741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5273577 - 5273741

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

PAPMLQYGGRNKTVATPNQG

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.1

0.43

62.5

43.4

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842