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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5275250_5275336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5275250 - 5275336

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTAATTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

AMWNMMLNIDVSATAFYRAQ

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

67.1

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.6

0.67

0.8

78.2

34.8

Minor 5ss

41.4

-1

2.5

47.9

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842