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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5278146_5280958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5278146 - 5280958

Intron Length:

2813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

TTGACTTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ATTTCTTTGACT

Flanking Amino Acid:

MEALGPGPPASLFQPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.4

35.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

70.7

0.47

0.9

66.1

35.7

Minor 5ss

26.7

-2.7

3.2

34.9

41.1

Minor BPS

83.8

1.15

0.9

93.38

27.4

Associated Gene:

Gene:

AGO4

Ensembl Gene ID:

ENSAPLG00000010882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011325

5269138 - 5280979

11842